来自用户 彬 的文献。
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1.
彬
(2023-07-31 23:42):
#paper Analysis of deep sequencing exosome‐microRNA expression profile derivedfrom CP‐II reveals potential role of gga‐miRNA‐451 in inflammation[J].Journal of Cellular and Molecular Medicine, 2020, 24(11):6178-6190.DOI:10.1111/jcmm.15244. 鸡败菌支原体(Mycoplasma gallsepticum, MG)感染会引起鸡呼吸道症状,并可能会导致胚胎死亡率增加,产蛋量减少等。现虽然已有研究报道miRNA在MG感染期间的炎症功能,但外泌体miRNA调节MG诱导炎症的机制仍有待阐明。该研究筛选了MG感染鸡Ⅱ型肺泡细胞外泌体gga-miRNA-451的表达,并预测差异表达miRNA的靶基因和功能。结果表明gga-miR-451可能在感染期间的免疫调节中发挥关键作用,其靶向YWHAZ调节MG诱导的炎症细胞因子的产生。
IF:4.300Q2
Journal of cellular and molecular medicine,
2020-06.
DOI: 10.1111/jcmm.15244
PMID: 32307881
Abstract:
Mycoplasma gallisepticum (MG) can cause chronic respiratory disease (CRD) in chickens. While several studies have reported the inflammatory functions of microRNAs during MG infection, the mechanism by which exosomal miRNAs …
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Mycoplasma gallisepticum (MG) can cause chronic respiratory disease (CRD) in chickens. While several studies have reported the inflammatory functions of microRNAs during MG infection, the mechanism by which exosomal miRNAs regulate MG-induced inflammation remains to be elucidated. The expression of exosome-microRNA derived from MG-infected chicken type II pneumocytes (CP-II) was screened, and the target genes and function of differentially expressed miRNAs (DEGs) were predicted. To verify the role of exosomal gga-miR-451, Western blot, ELISA and RT-qPCR were used in this study. The results showed that a total of 722 miRNAs were identified from the two exosomal small RNA (sRNA) libraries, and 30 miRNAs (9 up-regulated and 21 down-regulated) were significantly differentially expressed. The target miRNAs were significantly enriched in the treatment group, such as cell cycle, Toll-like receptor signalling pathway and MAPK signalling pathway. The results have also confirmed that gga-miR-451-absent exosomes derived from MG-infected CP-II cells increased inflammatory cytokine production in chicken fibroblast cells (DF-1), and wild-type CP-II cell-derived exosomes displayed protective effects. Collectively, our work suggests that exosomes from MG-infected CP-II cells alter the dynamics of the DF-1 cells, and may contribute to pathology of the MG infection via exosomal gga-miR-451 targeting YWHAZ involving in inflammation.
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2.
彬
(2023-06-30 23:50):
#paper doi: 10.3168/jds.2022-22540. Effect of diets enriched in n-6 or n-3 fatty acid on dry matter intake, energy balance, oxidative stress, and milk fat profile of transition cows. 这篇文献表明增加日粮中n-3 PUFA的含量可以增加过渡期奶牛的DMI和产后的产奶量。与产后补充饲喂n-6 PUFA相比,补充饲喂n-3 PUFA能更有效地缓解产后净能量平衡。同时补充饲喂n-3 PUFA可以降低牛乳中n-6 PUFA/n-3 PUFA的比例,该作者推测这可能是生产有益于人体健康食物的一种策略。
Abstract:
The objective of this study was to determine the effect of dietary supplementation of n-3 polyunsaturated fatty acids (PUFA) and n-6 PUFA on dry matter intake (DMI), energy balance, oxidative …
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The objective of this study was to determine the effect of dietary supplementation of n-3 polyunsaturated fatty acids (PUFA) and n-6 PUFA on dry matter intake (DMI), energy balance, oxidative stress, and performance of transition cows. Forty-five multiparous Holstein dairy cows with similar parity, body weight (BW), body condition score (BCS), and milk yield were used in a completely randomized design during a 56-d experimental period including 28 d prepartum and 28 d postpartum. At 240 d of pregnancy, cows were randomly assigned to one of the 3 isoenergetic and isoprotein dietary treatments, including a control ration containing 1% hydrogenated fatty acid (CON), a ration with 8% extruded soybean (HN6, high n-6 PUFA source), and a ration with 3.5% extruded flaxseed (HN3; high n-3 PUFA source). The HN6 and HN3 diets had an n-6/n-3 ratio of 3.05:1 and 0.64:1 in prepartum cows and 8.16:1 and 1.59:1 in postpartum cows, respectively. During the prepartum period (3, 2, and 1 wk before calving), DMI, DMI per unit of BW, total net energy intake, and net energy balance were higher in the HN3 than in the CON and NH6 groups. During the postpartum period (2, 3, and 4 wk after calving), cows fed HN3 and HN6 diets both showed increasing DMI, DMI as a percentage of BW, and total net energy intake compared with those fed the CON diet. The BW of calves in the HN3 group was 12.91% higher than those in the CON group. Yield and nutrient composition of colostrum (first milking after calving) were not affected by HN6 or HN3 but milk yield from 1 to 4 wk of milking was significantly improved compared with CON. During the transition period, BW, BCS, and BCS changes were not affected. Cows fed the HN6 diet had a higher plasma NEFA concentration compared with the CON cows during the prepartum period. Feeding HN3 reduced the proportion of de novo fatty acids and increased the proportion of preformed long-chain fatty acids in regular milk. In addition, the n-3 PUFA-enriched diet reduced the n-6/n-3 PUFA ratio in milk. In conclusion, increasing the n-3 fatty acids concentration in the diet increased both DMI during the transition period and milk production after calving, and supplementing n-3 fatty acids was more effective in mitigating the net energy balance after calving.
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3.
彬
(2023-05-31 22:30):
#paper Short communication: Dietary bovine milk–derived exosomes improve bone health in an osteoporosis-induced mouse model.DOI: 10.3168/jds.2019-17501. Yun等研究了牛初乳来源的外泌体在体外和体内是否可以促进抗骨质疏松症。抗酒石酸酸性磷酸酶染色的细胞在用外泌体处理过的Raw264.7细胞中受到了显著抑制,这表明破骨细胞的分化减少。口服给予外泌体2个月后,使用糖皮质激素颗粒诱发小鼠的骨质疏松症。与未经外泌体处理的糖皮质激素诱导的骨质疏松实验组相比,外泌体处理的小鼠实验组的骨矿物质密度显著提高。此外,骨质疏松症小鼠的肠道菌群中乳酸杆菌含量降低,但是通过摄入外泌体可以有效地恢复肠道菌群的组成。结果表明,从牛初乳中分离出的外泌体可能是预防骨质疏松症、改善骨重塑和抑制骨吸收的潜在候选物。牛初乳外泌体可以用作预防骨质疏松症的发作。
Abstract:
Osteoporosis is a systemic skeletal disease characterized by low bone mass and micro-architectural deterioration of bone tissue, with a consequent increase in bone fragility and fracture susceptibility. In an aged …
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Osteoporosis is a systemic skeletal disease characterized by low bone mass and micro-architectural deterioration of bone tissue, with a consequent increase in bone fragility and fracture susceptibility. In an aged society with increased life expectancy, the incidence rate of osteoporosis is also rapidly increasing. Inadequate nutrition may negatively influence bone metabolism. Recently, many studies have investigated the functionality of milk-derived exosomes, which play important roles in cell-to-cell communication. However, there are few reports of how milk-derived exosomes influence osteoblast proliferation and differentiation. Here, we determined whether bovine colostrum-derived exosomes promote anti-osteoporosis in vitro and in vivo. Tartrate-resistant acid phosphatase-stained cells were significantly inhibited in Raw264.7 cells treated with exosomes, indicating reduced osteoclast differentiation. We induced osteoporosis in mice using glucocorticoid pellets after orally administering exosomes for 2 mo. Interestingly, the bone mineral density of exosome-fed mouse groups was significantly improved compared with the glucocorticoid-induced osteoporosis group without exosome treatment. In addition, Lactobacillus were decreased in the gut microbiota community of osteoporosis-induced mice, but the gut microbiota community composition was effectively restored by exosome intake. Taken together, we propose that exosomes isolated from bovine colostrum could be a potential candidate for osteoporosis prevention, bone remodeling improvement, and inhibition of bone resorption. To our knowledge, this is the first time that a protective effect of milk exosomes against osteoporosis has been demonstrated in vivo. Our results strongly suggest that bovine colostrum exosomes might be used as a prophylaxis to prevent the onset of osteoporosis. Indeed, our results offer promising alternative strategies in the nutritional management of age-related bone complications.
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4.
彬
(2023-04-30 23:36):
#paper Fractionation of κ-casein from caprine micellar caseins using differential precipitation. https://doi.org/10.1016/j.idairyj.2023.105677. 江南大学食品科学与技术国家重点实验室等的Luo Guixin, Liu Xiaoming, Liu Dasong*, Zhou Peng等系统研究从山羊乳胶束酪蛋白浓缩物(micellar casein concentrate,MCC)中差异沉淀获得κ-酪蛋白的主要步骤中潜在关键加工条件的影响,还研究了酪蛋白浓度对κ-酪蛋白分馏的影响,旨在提高扩大条件下的加工能力。使用差异沉淀法对κ-酪蛋白进行分馏是基于单个酪蛋白在碱性pH值条件下对过量添加Ca的不同亲和力,然后进行中和,以促进αs-酪蛋白和β-酪蛋白的选择性沉淀。为提高从山羊乳MCC中分离的κ-酪蛋白产量和纯度,对每个主要步骤中的主要加工变量条件依次进行优化,得到最佳条件为:在pH 11.0条件下,使用匀浆再水合MCC(含3%酪蛋白),然后解离胶束;添加45 mmol/L Ca在25 ℃条件下络合酪蛋白60 min,然后使用2 mol/L乙酸在pH 7.0、25 ℃条件下再次沉淀β-/αs-酪蛋白60 min;使用2 个分馏循环,在第2个循环中添加50 mmol/L Ca,然后在pH 3.8、50 ℃条件下沉淀κ-酪蛋白。为提高扩大条件下的加工能力,将酪蛋白浓度提高4%~7%,同时添加60 mmol/L Ca,可获得与最佳条件下相当的κ-酪蛋白产量和纯度。在酪蛋白含量为4%时,MCC分散体中κ-酪蛋白的最大产量和纯度分别为84.6%和84.4%。
Abstract:
The effects of potentially important processing conditions at each step of differential precipitation on the yield and purity of κ-casein fractionated from caprine micellar casein concentrate (MCC) were investigated. The …
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The effects of potentially important processing conditions at each step of differential precipitation on the yield and purity of κ-casein fractionated from caprine micellar casein concentrate (MCC) were investigated. The optimal conditions were: rehydrating (3% casein) MCC using homogenisation followed by dissociating micelles at pH 11.0; complexing caseins using 45 mm added Ca at 25 °C for 60 min, followed by precipitating β-/αS-caseins using 2 m acetic acid at pH 7.0 again at 25 °C for 60 min. Two fractionation cycles were used with 50 mm added Ca for the second cycle, followed by precipitating κ-casein at pH 3.8 and 50 °C. To increase processing capacity for scale-up, increased casein concentrations of 4–7% along with 60 mm added Ca resulted in comparable yields and purity of the κ-casein. Maximum yield and purity of 84.6% and 84.4%, respectively, were achieved for κ-casein from the MCC dispersions at 4% casein.
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5.
彬
(2023-03-31 23:30):
#paper 2023-Structural changes induced by pasteurisation and/or high-pressure treatment of skim caprine milk。https://doi.org/10.1016/j.idairyj.2022.105528。该研究结果表明脱脂山羊乳的巴氏杀菌和高压(HP)组合(PHP)过程可以改变蛋白质的二级结构,导致表面疏水性增加。HP处理前的巴氏杀菌降低了α-螺旋结构含量,同时增加了β-折叠结构含量,这与脱脂山羊乳样品表面疏水性和固有荧光的变化有关。对于PHP和HP处理组样品,随着压力水平的增加和处理时间的延长,α-螺旋和β-转角结构含量降低,而β-折叠和无规卷曲结构含量增加。PHP处理可作为乳制品行业的一种良好替代技术,以提高脱脂山羊乳的功能特性。
Abstract:
The effects of pasteurisation, high-pressure (HP), and a combination of pasteurisation and high-pressure (PHP) on the physicochemical properties and protein structure of caprine skim milk was investigated. Samples treated by …
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The effects of pasteurisation, high-pressure (HP), and a combination of pasteurisation and high-pressure (PHP) on the physicochemical properties and protein structure of caprine skim milk was investigated. Samples treated by PHP generally had a higher pH, whey protein denaturation, surface hydrophobicity, and intrinsic fluorescence than those treated only with heat or pressure. In contrast, the size of skim milk casein micelles decreased significantly with an increase in pressure level and time; however, the effect was less marked when heat and pressure treatments were combined. For the PHP and HP samples, as the level and time of pressure increased, the α-helix and β-turn content reduced, whereas β-sheet and random coil were induced. Thus, PHP treatment could be used as a good alternative technology in the dairy industry to promote the functional properties of skim caprine milk.
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6.
彬
(2023-02-28 23:07):
#paper DOI:10.1080/19490976.2021.2022407. Epigenetic regulation by gut microbiota.肠道微生物最近比较火,因为它们可以指导宿主体内健康和疾病的环境刺激。虽然已经在局部肠细胞和外周组织中描述了微生物群敏感的表观遗传机制,但还需要进一步的研究来完全破译宿主和微生物群之间的复杂关系。这篇综述从连接微生物群和哺乳动物细胞的表观遗传调控、微生物代谢物作为表观遗传底物和酶调节因子、微生物群在稳态和炎症过程中指导DNA甲基化模式、宿主-微生物通过组蛋白修饰相互作用、SCFAs对免疫细胞的调节作用、非共价修饰等方面强调了目前对肠道微生物群表观遗传调控的理解,以及这些发现在指导治疗方法以预防或对抗由微生物-宿主相互作用受损引起的疾病方面的重要意义。
Abstract:
The gastrointestinal tract is continuously exposed to trillions of commensal microbes, collectively termed the microbiota, which are environmental stimuli that can direct health and disease within the host. In addition …
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The gastrointestinal tract is continuously exposed to trillions of commensal microbes, collectively termed the microbiota, which are environmental stimuli that can direct health and disease within the host. In addition to well-established bacterial sensing pathways, microbial signals are also integrated through epigenetic modifications that calibrate the transcriptional program of host cells without altering the underlying genetic code. Microbiota-sensitive epigenetic changes include modifications to the DNA or histones, as well as regulation of non-coding RNAs. While microbiota-sensitive epigenetic mechanisms have been described in both local intestinal cells and as well in peripheral tissues, further research is required to fully decipher the complex relationship between the host and microbiota. This Review highlights current understandings of epigenetic regulation by gut microbiota and important implications of these findings in guiding therapeutic approaches to prevent or combat diseases driven by impaired microbiota-host interactions.
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7.
彬
(2023-01-31 23:40):
#paper Dachs N, Upadhyay M, Hannemann E. Quantitative trait locus for calving traits on Bos taurus autosome 18 in Holstein cattle is embedded in a complex genomic region. J Dairy Sci. 2023 Jan 27:S0022-0302(23)00025-5. doi: 10.3168/jds.2021-21625. 已有研究显示荷斯坦-里弗斯牛及其杂交牛18号染色体上的数量性状与其产犊质量有关,但还未确定具体的相关基因。该研究通过分析大样本的群体基因分型数据、全基因组测序数据、荷斯坦-里弗斯牛动物样本的基因组组装,确定了与畅读质量相关的数量性状位点95%置信区间在18号染色体58.34 至 59.43 Mbp之间。其中有4个SNP与QTL单倍型为连锁不平衡。接下来的工作可能就是分析相关基因或与繁殖性状进行关联分析等等。该研究提供的数据全面描述了基因组特征,这些特征也可能与其他各种牛品种和家畜物种中的其他此类难以捉摸的QTL相关。
Abstract:
Although the quantitative trait locus (QTL) on chromosome 18 (BTA18) associated with paternal calving ease and stillbirth in Holstein Friesian cattle and its cross has been known for over 20 …
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Although the quantitative trait locus (QTL) on chromosome 18 (BTA18) associated with paternal calving ease and stillbirth in Holstein Friesian cattle and its cross has been known for over 20 years, to our knowledge, the exact causal genetic sequence has yet escaped identification. The aim of this study was to re-examine the region of the published QTL on BTA18 and to investigate the possible reasons behind this elusiveness. For this purpose, we carried out a combined linkage disequilibrium and linkage analysis using genotyping data of 2,697 German Holstein Friesian (HF) animals and subsequent whole-genome sequencing (WGS) data analyses and genome assembly of HF samples. We confirmed the known QTL in the 95% confidence interval of 1.089 Mbp between 58.34 and 59.43 Mbp on BTA18. Additionally, these 4 SNPs in the near-perfect linkage disequilibrium with the QTL haplotype were identified: rs381577268 (on 57,816,137 bp, C/T), rs381878735 (on 59,574,329 bp, A/T), rs464221818 (on 59,329,176 bp, C/T), and rs472502785 (on 59,345,689 bp, T/C). Search for the causal mutation using short and long-read sequences, and methylation data of the BTA18 QTL region did not reveal any candidates though. The assembly showed problems in the region, as well as an abundance of segmental duplications within and around the region. Taking the QTL of BTA18 in Holstein cattle as an example, the data presented in this study comprehensively characterize the genomic features that could also be relevant for other such elusive QTL in various other cattle breeds and livestock species as well.
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8.
彬
(2022-12-31 22:41):
#paper Differential gene expression in dairy cows under negative energy balance and ketosis: A systematic review and meta-analysis. J Dairy Sci. 2021 Jan;104(1):602-615. doi: 10.3168/jds.2020-18883. 为了评估负能量平衡(NEB)、亚临床和临床酮症奶牛肝脏中差异基因表达的模式,该文筛选了NEB和临床和亚临床酮症期间基因表达的同行评审和相关文章(其中考虑到血浆β-羟基丁酸盐水平),创建维恩图以整合系统综述中获得的数据,并使用官方基因名称进行基因本体富集分析,确定了三种重要的代谢途径与NEB和亚临床和临床酮症相关。基因网络分析揭示了34个与脂肪酸转运和脂肪酸代谢功能相关的基因之间的共表达相互作用。在标记的QTL中,鉴定出9个与酮症相关的QTL。基因表达和GWAS数据的整合为奶牛NEB和亚临床和临床酮症的遗传背景提供了额外的理解。
Abstract:
Development of ketosis in high-producing dairy cows contributes to several animal health issues and highlights the need for a better understanding of the genetic basis of metabolic diseases. To evaluate …
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Development of ketosis in high-producing dairy cows contributes to several animal health issues and highlights the need for a better understanding of the genetic basis of metabolic diseases. To evaluate the pattern of differential gene expression in the liver of cows under negative energy balance (NEB), and under subclinical and clinical ketosis, a meta-analysis of gene expression and genome-wide association studies results was performed. An initial systematic review identified 118 articles based on the key words "cow," "liver," "negative energy balance," "ketosis," "expression," "qPCR," "microarray," "proteomic," "RNA-Seq," and "GWAS." After further screening for only peer-reviewed and pertinent articles for gene expression during NEB and clinical and subclinical ketosis (considering plasma levels of β-hydroxybutyrate), 20 articles were included in the analysis. From the systematic review, 430 significant SNPs identified by genome-wide association studies (GWAS) were assigned to genes reported in gene expression studies by considering chromosome and base pair positions in the ARS-UCD 1.2 bovine assembly. Venn diagrams were created to integrate the data obtained in the systematic review, and Gene Ontology enrichment analysis was carried out using official gene names. A QTL enrichment analysis was also performed to identify potential positional candidate loci. Twenty-four significant SNPs were located within the coordinates of differentially expressed genes located on chromosomes 2, 3, 6, 9, 11, 14, 27, and 29. Three significant metabolic pathways were associated with NEB and subclinical and clinical ketosis. In addition, 2 important genes, PPARA (peroxisome proliferator activated receptor alpha) and ACACA (acetyl-coenzyme A carboxylase α), were identified, which were differentially expressed in the 3 metabolic conditions. The PPARA gene is involved in the regulation of lipid metabolism and fatty liver disease and the ACACA gene encodes an enzyme that catalyzes the carboxylation of acetyl-coenzyme A to malonyl-coenzyme A, which is a rate-limiting step in fatty acid synthesis. Gene network analysis revealed co-expression interactions among 34 genes associated with functions involving fatty acid transport and fatty acid metabolism. For the annotated QTL, 9 QTL were identified for ketosis. The genes FN1 (fibronectin 1) and PTK2 (protein tyrosine kinase 2), which are mainly involved in cell adhesion and formation of extracellular matrix constituents, were enriched for QTL previously associated with the trait "ketosis" on chromosome 2 and for the trait "milk iron content" on chromosome 14, respectively. This integration of gene expression and GWAS data provides an additional understanding of the genetic background of NEB and subclinical and clinical ketosis in dairy cattle. Thus, it is a useful approach to identify biological mechanisms underlying these metabolic conditions in dairy cattle.
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9.
彬
(2022-11-30 23:31):
#paper doi: 10.3168/jds.2009-2581. Conte G , Mele M , Chessa S , et al. Diacylglycerol acyltransferase 1, stearoyl-CoA desaturase 1, and sterol regulatory element binding protein 1 gene polymorphisms and milk fatty acid composition in Italian Brown cattle[J]. Journal of Dairy Science, 2010, 93(2):753-763. 该研究对意大利褐牛群的SCD1、DGAT1和SREBP1基因进行分型,并研究了这3个基因分型是否与乳中脂肪酸组成相关。结果显示意大利褐牛SCD1、SREBP1和DGAT1这3个基因的基因频率分别为82%、84%和98%,表现出等位基因分布不平衡,SCD1和DGAT1基因多态性与牛奶脂肪酸组分显著相关,而SREBP1基因多态性与牛奶脂肪酸组分关联不显著。
Abstract:
Several lipogenic genes have been shown to have effects on lipid metabolism: stearoyl CoA desaturase 1 (SCD1) catalyzes the desaturation of several fatty acids (FA) in the cis-Delta(9) position in …
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Several lipogenic genes have been shown to have effects on lipid metabolism: stearoyl CoA desaturase 1 (SCD1) catalyzes the desaturation of several fatty acids (FA) in the cis-Delta(9) position in mammary glands of ruminant animals, diacylglycerol acyltransferase 1 (DGAT1) is a key enzyme in triacylglycerol synthesis in the mammary gland, and sterol regulatory element binding protein (SREBP-1) is a transcription factor that regulates expression levels of the SCD1 gene and other genes relevant to lipid and FA metabolism in adipose tissue and mammary gland. In this work, 351 Italian Brown cows were genotyped for polymorphisms in the SCD1, SREBP-1, and DGAT1 genes to reveal the allelic distribution in the population. Subsequently, effects on individual milk FA composition and on cis-9 unsaturated/saturated FA ratios, a proxy of mammary stearoyl CoA desaturase activity, were investigated. The genotypes of SCD1 (A293V) and DGAT1 (K232A) were determined by an approach based on the ligation detection reaction and a universal array, whereas the genotype of SREBP-1 (84-bp insertion-deletion) was revealed by PCR amplification of intron 5. The genotype analysis showed an unbalanced distribution of alleles within all genes, being the allele with higher gene frequency at 82, 84, and 98% for SCD1, SREBP-1, and DGAT1, respectively. Significant associations between SCD1 and DGAT1 polymorphisms and milk FA composition were found, whereas SREBP-1 polymorphism was not associated with milk FA composition. In particular, SCD1 showed significant association with C14:1 cis-9 and C14:1 cis-9/C14:0, which is considered the best proxy of the desaturation activity in mammary gland. The DGAT1 polymorphism had the strongest association with milk FA composition, which confirmed the key role of DGAT1 in lipid metabolism of mammary gland. However, the unbalanced distribution of alleles in all polymorphisms investigated suggested that the size of population should be increased to confirm the results of the present study.
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