来自用户 惊鸿 的文献。
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21.
惊鸿 (2023-06-25 16:56):
#paper https://doi.org/10.1021/acssynbio.3c00216 Immortalized Bovine Satellite Cells for Cultured Meat Applications 为了使培养肉大规模成功,来自食品相关物种的肌肉细胞必须以快速可靠的方式在体外扩增,以每年产生数百万公吨的生物质。为了实现这一目标,遗传永生化细胞比原代细胞具有实质性的好处,包括快速生长、逃离细胞衰老以及一致的起始细胞群进行生产。在这里,我们通过牛端粒酶逆转录酶(TERT)和细胞周期蛋白依赖性激酶4(CDK4)的组成表达开发遗传永生化的牛卫星细胞(iBSC)。这些细胞在发表时实现了超过120倍的倍增,并保持其肌源分化的能力。因此,它们为该领域提供了有价值的工具,使进一步的研究和开发能够推进培养肉。
Abstract:
For cultured meat to succeed at scale, muscle cells from food-relevant species must be expanded in vitro in a rapid and reliable manner to produce millions of metric tons of … >>>
For cultured meat to succeed at scale, muscle cells from food-relevant species must be expanded in vitro in a rapid and reliable manner to produce millions of metric tons of biomass annually. Toward this goal, genetically immortalized cells offer substantial benefits over primary cells, including rapid growth, escape from cellular senescence, and consistent starting cell populations for production. Here, we develop genetically immortalized bovine satellite cells (iBSCs) via constitutive expression of bovine Telomerase reverse transcriptase (TERT) and Cyclin-dependent kinase 4 (CDK4). These cells achieve over 120 doublings at the time of publication and maintain their capacity for myogenic differentiation. They therefore offer a valuable tool to the field, enabling further research and development to advance cultured meat. <<<
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22.
惊鸿 (2023-05-29 09:56):
#paper Date  : 2023-05-05 DOI : 10.1021/acssynbio.3c00216 Immortalized Bovine Satellite Cells for Cultured Meat Applications该论文提到,为了使培养肉在规模上成功,食用相关物种的肌肉细胞必须在体外快速可靠地扩展,从而每年生产数百万吨的生物量。基因不老化的细胞比原代细胞具有显着的优势,包括快速增长、逃避细胞衰老和始终一致的起始细胞群体生产。因此,研究人员通过持续表达牛端粒酶逆转录酶(TERT)和Cyclin-dependent kinase 4(CDK4)开发了基因不老化的牛卫星细胞(iBSCs)。这些细胞在发布时已经实现了超过120倍增殖,并保持了其肌肉分化能力。因此,它们为这一领域提供了有价值的工具,可以进一步推动培养肉的研究和开发。
IF:3.700Q1 ACS synthetic biology, 2023-05-19. DOI: 10.1021/acssynbio.3c00216 PMID: 37146268
Abstract:
For cultured meat to succeed at scale, muscle cells from food-relevant species must be expanded in vitro in a rapid and reliable manner to produce millions of metric tons of … >>>
For cultured meat to succeed at scale, muscle cells from food-relevant species must be expanded in vitro in a rapid and reliable manner to produce millions of metric tons of biomass annually. Toward this goal, genetically immortalized cells offer substantial benefits over primary cells, including rapid growth, escape from cellular senescence, and consistent starting cell populations for production. Here, we develop genetically immortalized bovine satellite cells (iBSCs) via constitutive expression of bovine Telomerase reverse transcriptase (TERT) and Cyclin-dependent kinase 4 (CDK4). These cells achieve over 120 doublings at the time of publication and maintain their capacity for myogenic differentiation. They therefore offer a valuable tool to the field, enabling further research and development to advance cultured meat. <<<
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23.
惊鸿 (2023-04-19 15:35):
#paper Pub Date : 2019-01-23 DOI : 10.1038/s41564-018-0355-8 Harnessing undomesticated life 在实验室中只能对细菌进行细微的培养和工程改造,这限制了我们在恶劣环境中部署细菌或使用细菌生产重要化合物的能力。最近的工作通过开发新的方法来表征和工程化各种未驯化的细菌物种,从而打开了这一领域。这些技术可用于环境改造,为人类以后殖民外太空有极大的帮助
24.
惊鸿 (2023-03-27 11:42):
#paper doi:https://ma.x-mol.com/paperRedirect/1639426668090503168 Thymidine nucleotide metabolism controls human telomere length 人类的端粒长度与寿命和严重疾病有关,但端粒长度的遗传决定因素仍未完全确定。在这里,我们进行了全基因组 CRISPR-Cas9 功能性端粒长度筛选,并将胸苷 (dT) 核苷酸代谢确定为人类端粒维持的限制因素。使用 CRISPR-Cas9 的靶向基因破坏揭示了胸苷核苷酸代谢途径中的多个端粒长度控制点:通过删除编码核胸苷激酶 ( TK1 ) 的基因减少 dT 核苷酸回收或通过敲除胸苷酸合酶基因 (TYMS )从头产生端粒长度减少,而脱氧核苷三磷酸水解酶编码基因SAMHD1失活延长的端粒。值得注意的是,单独补充 dT 可通过细胞中的端粒酶驱动端粒的稳健延伸,并且三磷酸胸苷在体外以底物非依赖性方式刺激端粒酶活性。在源自遗传性端粒生物学障碍患者的诱导多能干细胞中,补充 dT 或抑制SAMHD1可促进端粒恢复。我们的结果表明胸苷代谢在控制人端粒酶和端粒长度方面的关键作用,这可能对致命的退行性疾病患者具有治疗作用。
IF:31.700Q1 Nature genetics, 2023-04. DOI: 10.1038/s41588-023-01339-5 PMID: 36959362
Abstract:
Telomere length in humans is associated with lifespan and severe diseases, yet the genetic determinants of telomere length remain incompletely defined. Here we performed genome-wide CRISPR-Cas9 functional telomere length screening … >>>
Telomere length in humans is associated with lifespan and severe diseases, yet the genetic determinants of telomere length remain incompletely defined. Here we performed genome-wide CRISPR-Cas9 functional telomere length screening and identified thymidine (dT) nucleotide metabolism as a limiting factor in human telomere maintenance. Targeted genetic disruption using CRISPR-Cas9 revealed multiple telomere length control points across the thymidine nucleotide metabolism pathway: decreasing dT nucleotide salvage via deletion of the gene encoding nuclear thymidine kinase (TK1) or de novo production by knockout of the thymidylate synthase gene (TYMS) decreased telomere length, whereas inactivation of the deoxynucleoside triphosphohydrolase-encoding gene SAMHD1 lengthened telomeres. Remarkably, supplementation with dT alone drove robust telomere elongation by telomerase in cells, and thymidine triphosphate stimulated telomerase activity in a substrate-independent manner in vitro. In induced pluripotent stem cells derived from patients with genetic telomere biology disorders, dT supplementation or inhibition of SAMHD1 promoted telomere restoration. Our results demonstrate a critical role of thymidine metabolism in controlling human telomerase and telomere length, which may be therapeutically actionable in patients with fatal degenerative diseases. <<<
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25.
惊鸿 (2023-02-28 21:15):
#paper DOI : 10.1021/acsnano.2c10477 Floating Seawater Splitting Device Based on NiFeCrMo Metal Hydroxide Electrocatalyst and Perovskite/Silicon Tandem Solar Cells 海水光伏制氢意义重大。太阳能驱动海水电解面临的析氯反应竞争、氯化物腐蚀、催化剂中毒等挑战严重制约了该技术的发展。在本文中,我们报道了一种由 Ni、Fe、Cr 和 Mo 元素组成的二维纳米片季金属氢氧化物催化剂。通过原位电化学活化,部分钼元素在催化剂中被浸出并发生形态转变。获得了更高的金属价态和许多 O 空位,在工业要求的 500 mA cm –2 电流密度下,在整体碱性海水电解中提供了优异的催化活性和耐腐蚀性在室温下 1.82 V 低电压下超过 1000 小时。漂浮的太阳能海水分解装置显示出 20.61 ± 0.77% 的太阳能制氢 (STH) 效率。这项工作展示了高效太阳能海水电解装置的发展,并可能促进清洁能源转换的研究。
IF:15.800Q1 ACS nano, 2023-Mar-14. DOI: 10.1021/acsnano.2c10477 PMID: 36808966
Abstract:
Photovoltaic hydrogen production from seawater is of great significance. Challenges of solar-driven seawater electrolysis, for example, competing among chlorine evolution reactions, chloride corrosion, and catalyst poisoning, seriously restrict the development … >>>
Photovoltaic hydrogen production from seawater is of great significance. Challenges of solar-driven seawater electrolysis, for example, competing among chlorine evolution reactions, chloride corrosion, and catalyst poisoning, seriously restrict the development of this technology. In this paper, we report a two-dimensional nanosheet quaternary metal hydroxide catalyst composed of Ni, Fe, Cr, and Mo elements. By in situ electrochemical activation, a partial Mo element was leached and morphologically transformed in the catalyst. The higher metal valence states and many O vacancies were obtained, providing excellent catalytic activity and corrosion resistance in overall alkaline seawater electrolysis operating at an industrial-required current density of 500 mA cm over 1000 h under 1.82 V low voltages at room temperature. The floating solar seawater splitting device shows a 20.61 ± 0.77% efficiency of solar energy to hydrogen (STH). This work demonstrates the development of efficient solar seawater electrolysis devices and potentially promotes research on clean energy conversion. <<<
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26.
惊鸿 (2023-01-07 21:44):
#paper DOI : 10.1038/s43587-022-00340-7 Pub Date:2022-12-30Optogenetic rejuvenation of mitochondrial membrane potential extends C. elegans lifespan 线粒体功能障碍在衰老中起着核心作用,但确切的生物学原因仍在确定中。在这里,我们展示了使用光激活质子泵在成年期通过光遗传学增加线粒体膜电位可改善与年龄相关的表型并延长秀丽隐杆线虫的寿命。我们的研究结果提供了直接的因果证据,表明挽救与年龄相关的线粒体膜电位下降足以减缓衰老速度并延长健康寿命和寿命。
IF:17.000Q1 Nature aging, 2023-02. DOI: 10.1038/s43587-022-00340-7 PMID: 36873708
Abstract:
Mitochondrial dysfunction plays a central role in aging but the exact biological causes are still being determined. Here, we show that optogenetically increasing mitochondrial membrane potential during adulthood using a … >>>
Mitochondrial dysfunction plays a central role in aging but the exact biological causes are still being determined. Here, we show that optogenetically increasing mitochondrial membrane potential during adulthood using a light-activated proton pump improves age-associated phenotypes and extends lifespan in . Our findings provide direct causal evidence that rescuing the age-related decline in mitochondrial membrane potential is sufficient to slow the rate of aging and extend healthspan and lifespan. <<<
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27.
惊鸿 (2022-12-29 15:54):
#paper DOI : 10.1126/science.abl6620 Glassfrogs conceal blood in their liver to maintain transparency 20221222 动物的透明体是一种复杂的伪装形式,涉及减少整个生物体的光散射和吸收的机制。在脊椎动物中,获得透明度很困难,因为它们的循环系统充满了强烈减弱光线的红细胞 (RBC)。在此,这个实验团队记录了玻璃蛙如何通过隐藏这些细胞。该实验团队使用光声成像在体内追踪红细胞,表明静息玻璃蛙通过从循环中去除约 89% 的红细胞并将其包装在肝脏中,从而将透明度提高两到三倍。因此,脊椎动物的透明性需要透明组织和从这些组织中“清除”呼吸色素的活跃机制。此外,玻璃蛙能够调节位置、密度。
Abstract:
Transparency in animals is a complex form of camouflage involving mechanisms that reduce light scattering and absorption throughout the organism. In vertebrates, attaining transparency is difficult because their circulatory system … >>>
Transparency in animals is a complex form of camouflage involving mechanisms that reduce light scattering and absorption throughout the organism. In vertebrates, attaining transparency is difficult because their circulatory system is full of red blood cells (RBCs) that strongly attenuate light. Here, we document how glassfrogs overcome this challenge by concealing these cells from view. Using photoacoustic imaging to track RBCs in vivo, we show that resting glassfrogs increase transparency two- to threefold by removing ~89% of their RBCs from circulation and packing them within their liver. Vertebrate transparency thus requires both see-through tissues and active mechanisms that "clear" respiratory pigments from these tissues. Furthermore, glassfrogs' ability to regulate the location, density, and packing of RBCs without clotting offers insight in metabolic, hemodynamic, and blood-clot research. <<<
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28.
惊鸿 (2022-11-28 10:33):
#paper CRISPRing future medicinesExpert Opin. Drug Discov.PubDate:2021-01-03DOI:10.1080/17460441.2021.1850687Laure Grand Moursel 1 , Mijke Visser 1 , Geraldine Servant 1 , Selvi Durmus 1 , Anne-Marie Zuurmond 1这是以快速且具有成本效益的方式设计哺乳动物基因组的能力导致 CRISPR 技术在生物医学研究中的快速适应。基于 CRISPR 的工程具有加速药物发现、支持降低药物开发中的高损耗率以及促进细胞和基因疗法的开发的潜力。CRISPR 技术正迅速成为基因组工程的首选工具,如今很难想象没有这项技术的药物发现管道。随着未来几年,CRISPR 技术无疑将得到进一步完善,并将蓬勃发展成为一项成熟的技术,它将在支持药物发现管道以及细胞和基因治疗开发中的基因组工程要求方面发挥关键作用。
Abstract:
: The ability to engineer mammalian genomes in a quick and cost-effective way has led to rapid adaptation of CRISPR technology in biomedical research. CRISPR-based engineering has the potential to … >>>
: The ability to engineer mammalian genomes in a quick and cost-effective way has led to rapid adaptation of CRISPR technology in biomedical research. CRISPR-based engineering has the potential to accelerate drug discovery, to support the reduction of high attrition rate in drug development and to enhance development of cell and gene-based therapies.: How CRISPR technology is transforming drug discovery is discussed in this review. From target identification to target validation in both and models, CRISPR technology is positively impacting the early stages of drug development by providing a straightforward way to genome engineering. This property also attracted attention for CRISPR application in the cell and gene therapy area.: CRISPR technology is rapidly becoming the preferred tool for genome engineering and nowadays it is hard to imagine the drug discovery pipeline without this technology. With the years to come, CRISPR technology will undoubtedly be further refined and will flourish into a mature technology that will play a key role in supporting genome engineering requirements in the drug discovery pipeline as well as in cell and gene therapy development. <<<
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29.
惊鸿 (2022-10-31 10:45):
#paper Clipping cancer with CRISPR Cancer Cytopathology ( IF 4.264 ) Pub Date : 2018-01-01 , DOI: 10.1002/cncy.21964 它是一种细菌自我保护,不然细菌就会在几分钟内死亡。许多细菌(和古生菌)可以扭转其病毒攻击的机制的侦查已迅速成为生物医学中最热门的研究领域之一。细菌 CRISPR(成簇的规则间隔短回文重复序列)-Cas9(CRISPR 相关蛋白 9)酶系统被重新用作精确的 DNA 编辑工具,已在广泛的应用中显示出早期前景,包括努力发现癌症通路和设计更有针对性的化疗药物。然而,科学家们敦促谨慎对待意外基因或产生脱靶效应的风险,以及永久改变遗传 DNA 的可能性;这让人想起 1990 年代后期围绕基因治疗的安全和伦理问题。在 CRISPR 系统的希望和严格审查中,最近的几项研究表明,新工具如何避免过去的一些陷阱,以及它如何在准备用于临床之前克服更多陷阱。该技术需要面临许多挑战,并且要避免对该项技术的过多幻想,否则将会给我们带来失望。
30.
惊鸿 (2022-09-27 09:09):
#paper doi:Volume 40, Issue 9, 12 September 2022, Pages 999-1009.e6Detection and localization of early- and late-stage cancers using platelet 这篇论文解释了RNA癌症患者受益于早期肿瘤检测,因为治疗结果对不太晚期的癌症更有利。血小板参与癌症进展,被认为是癌症检测的有前途的生物来源,因为它们根据局部和全身线索改变其RNA含量。我们表明,基于肿瘤的血小板(TEP)RNA血液测试能够检测18种癌症类型。血栓形成Seq在无症状对照组的特异性为99%,在I-IV期癌症患者的1,096份血液样本中有三分之二和352名I-III期肿瘤中的一半中正确检测到癌症的存在。对症对照组,包括炎症和心血管疾病以及良性肿瘤,假阳性检测结果增加,平均特异性为78%。此外,血栓形成Seq在超过80%的癌症患者中正确确定了五种不同肿瘤类型的肿瘤起源部位。这些结果突出了TEP衍生的RNA组合的潜在特性,以补充当前基于血液的癌症筛查方法。
IF:48.800Q1 Cancer cell, 2022-09-12. DOI: 10.1016/j.ccell.2022.08.006 PMID: 36055228
Sjors G J G In 't Veld, Mohammad Arkani, Edward Post, Mafalda Antunes-Ferreira, Silvia D'Ambrosi, Daan C L Vessies, Lisa Vermunt, Adrienne Vancura, Mirte Muller, Anna-Larissa N Niemeijer, Jihane Tannous, Laura L Meijer, Tessa Y S Le Large, Giulia Mantini, Niels E Wondergem, Kimberley M Heinhuis, Sandra van Wilpe, A Josien Smits, Esther E E Drees, Eva Roos, Cyra E Leurs, Lee-Ann Tjon Kon Fat, Ewoud J van der Lelij, Govert Dwarshuis, Maarten J Kamphuis, Lisanne E Visser, Romee Harting, Annemijn Gregory, Markus W Schweiger, Laurine E Wedekind, Jip Ramaker, Kenn Zwaan, Heleen Verschueren, Idris Bahce, Adrianus J de Langen, Egbert F Smit, Michel M van den Heuvel, Koen J Hartemink, Marijke J E Kuijpers, Mirjam G A Oude Egbrink, Arjan W Griffioen, Rafael Rossel, T Jeroen N Hiltermann, Elizabeth Lee-Lewandrowski, Kent B Lewandrowski, Philip C De Witt Hamer, Mathilde Kouwenhoven, Jaap C Reijneveld, William P J Leenders, Ann Hoeben, Irma M Verdonck-de Leeuw, C René Leemans, Robert J Baatenburg de Jong, Chris H J Terhaard, Robert P Takes, Johannes A Langendijk, Saskia C de Jager, Adriaan O Kraaijeveld, Gerard Pasterkamp, Minke Smits, Jack A Schalken, Sylwia Łapińska-Szumczyk, Anna Łojkowska, Anna J Żaczek, Henk Lokhorst, Niels W C J van de Donk, Inger Nijhof, Henk-Jan Prins, Josée M Zijlstra, Sander Idema, Johannes C Baayen, Charlotte E Teunissen, Joep Killestein, Marc G Besselink, Lindsay Brammen, Thomas Bachleitner-Hofmann, Farrah Mateen, John T M Plukker, Michal Heger, Quirijn de Mast, Ton Lisman, D Michiel Pegtel, Harm-Jan Bogaard, Jacek Jassem, Anna Supernat, Niven Mehra, Winald Gerritsen, Cornelis D de Kroon, Christianne A R Lok, Jurgen M J Piek, Neeltje Steeghs, Winan J van Houdt, Ruud H Brakenhoff, Gabe S Sonke, Henk M Verheul, Elisa Giovannetti, Geert Kazemier, Siamack Sabrkhany, Ed Schuuring, Erik A Sistermans, Rob Wolthuis, Hanne Meijers-Heijboer, Josephine Dorsman, Cees Oudejans, Bauke Ylstra, Bart A Westerman, Daan van den Broek, Danijela Koppers-Lalic, Pieter Wesseling, R Jonas A Nilsson, W Peter Vandertop, David P Noske, Bakhos A Tannous, Nik Sol, Myron G Best, Thomas Wurdinger <<<
Abstract:
Cancer patients benefit from early tumor detection since treatment outcomes are more favorable for less advanced cancers. Platelets are involved in cancer progression and are considered a promising biosource for … >>>
Cancer patients benefit from early tumor detection since treatment outcomes are more favorable for less advanced cancers. Platelets are involved in cancer progression and are considered a promising biosource for cancer detection, as they alter their RNA content upon local and systemic cues. We show that tumor-educated platelet (TEP) RNA-based blood tests enable the detection of 18 cancer types. With 99% specificity in asymptomatic controls, thromboSeq correctly detected the presence of cancer in two-thirds of 1,096 blood samples from stage I-IV cancer patients and in half of 352 stage I-III tumors. Symptomatic controls, including inflammatory and cardiovascular diseases, and benign tumors had increased false-positive test results with an average specificity of 78%. Moreover, thromboSeq determined the tumor site of origin in five different tumor types correctly in over 80% of the cancer patients. These results highlight the potential properties of TEP-derived RNA panels to supplement current approaches for blood-based cancer screening. <<<
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31.
惊鸿 (2022-08-14 18:12):
#paper doi:10.1101/2022.08.08.503198 Bilallelic germline mutations in MAD1L1 induce a novel syndrome of aneuploidy with high tumor susceptibility MAD1L1是编码纺锤体组装检查点 (SAC) 蛋白MAD1的基因,发生在一名36岁的患有十几个肿瘤的女性身上,包括五个恶性肿瘤。外周血细胞的功能研究表明缺乏全长蛋白质和SAC反应不足,导致细胞遗传学和单细胞 (sc) 检测到约30-40% 的非整倍体细胞DNA分析。对患者血细胞的scRNA-seq分析确定了线粒体应激伴随全身炎症,干扰素和NFkB信号增强。MAD1L1突变还导致 γ δ T细胞的特异性克隆扩增,增加了18号染色体并增强了细胞毒性,以及具有慢性淋巴细胞白血病细胞特征的染色体12增益和转录组特征的中间b细胞。这些数据表明MAD1L1突变是一种新的具有全身炎症和前所未有的肿瘤易感性的非整倍体综合征的原因。 仅仅一个基因片段就可以给全身带来变化,这些变化有好有坏,所以基因编辑不是消消乐,是一个严谨的技术,这是一个基因工程师应有的心态
Abstract:
Aneuploidy is a frequent feature of human tumors. Germline mutations leading to aneuploidy are very rare in humans, and their tumor-promoting properties are mostly unknown at the molecular level. We … >>>
Aneuploidy is a frequent feature of human tumors. Germline mutations leading to aneuploidy are very rare in humans, and their tumor-promoting properties are mostly unknown at the molecular level. We report here novel germline biallelic mutations in MAD1L1, the gene encoding the Spindle Assembly Checkpoint (SAC) protein MAD1, in a 36-year-old female with a dozen of neoplasias, including five malignant tumors. Functional studies in peripheral blood cells demonstrated lack of full-length protein and deficient SAC response, resulting in ∼30-40% of aneuploid cells as detected by cytogenetic and single-cell (sc) DNA analysis. scRNA-seq analysis of patient blood cells identified mitochondrial stress accompanied by systemic inflammation with enhanced interferon and NFkB signaling. The inference of chromosomal aberrations from scRNA-seq analysis detected inflammatory signals both in aneuploid and euploid cells, suggesting a non-cell autonomous response to aneuploidy. In addition to random aneuploidies, MAD1L1 mutations resulted in specific clonal expansions of γδ T-cells with chromosome 18 gains and enhanced cytotoxic profile, as well as intermediate B-cells with chromosome 12 gains and transcriptomic signatures characteristic of chronic lymphocytic leukemia cells. These data point to MAD1L1 mutations as the cause of a new aneuploidy syndrome with systemic inflammation and unprecedented tumor susceptibility. <<<
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