来自杂志 Experimental cell research 的文献。
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1.
龙海晨 (2024-09-19 12:12):
#paper Zhu Q, Wan NB, Deng HW, Lu LL, Zhang Y, He X, Liu H, He Y. SEC14L3 plays a tumor-suppressive role in breast cancer through a Wnt/β-catenin-related way. Exp Cell Res. 2022 Aug 1;417(1):113161. doi: 10.1016/j.yexcr.2022.113161. Epub 2022 Apr 18. PMID: 35447102.这是一篇生物信息与分子生物学细胞生物学实验相结合的文章。文章先对TCGA-BRCA数据集进行挖掘,发现IL1F6、MRGPRX1、SEC14L3与乳腺癌患者总生存期显著相关。SEC14L3对乳腺癌的生存益处最大,选择SEC14L3进行后续研究(细胞生物学,分子生物层面)。在后续的研究重发现,SEC14L3 mRNA表达和蛋白表达情况,乳腺癌细胞系明显低于正常的乳腺上皮细胞。SEC14L3 过度表达可以抑制癌细胞迁移和侵袭的能力。SEC14L3 过表达降低了间质标志物的水平,而 SEC14L3 敲低则促进了乳腺癌细胞的恶性行为。SEC14L3 过表达还抑制了 Wnt/β-catenin 激活。乳腺癌细胞和组织中低表达的SEC14L3可能通过Wnt /β-catenin相关的方式发挥肿瘤抑制作用。
Abstract:
Breast cancer, the most prevalent malignancy in women, is also the leading cause of cancer-related deaths in women worldwide. The activation of the Wnt pathway plays a pivotal role in … >>>
Breast cancer, the most prevalent malignancy in women, is also the leading cause of cancer-related deaths in women worldwide. The activation of the Wnt pathway plays a pivotal role in the metastatic abilities of breast cancer. In this study, IL1F6, MRGPRX1, and SEC14L3 were significantly correlated to breast cancer patients'overall survival based on TCGA-BRCA dataset. Although IL1F6, MRGPRX1 and SEC14L3 high expression were associated with better survival in breast cancer patients, SEC14L3 had the biggest survival benefit for breast cancer; therefore, SEC14L3 was selected for the subsequent investigation. SEC14L3 mRNA expression and protein levels within breast cancer cell lines decreased compared with normal human breast epithelial cells. Overexpressing SEC14L3 in breast cancer cells inhibited the malignant phenotypes of cancer cells, including the capacity of cells to migrate and invade. SEC14L3 overexpression decreased the levels of mesenchymal markers, whereas SEC14L3 knockdown facilitated the malignant behaviors of breast cancer cells. SEC14L3 overexpression also inhibited Wnt/β-catenin activation. The Wnt agonist strengthened the malignant phenotypes of breast cancer cells; moreover, the anti-tumor effects of SEC14L3 overexpression were partially attenuated by the Wnt agonist. Conclusively, SEC14L3, which is underexpressed in breast cancer cells and tissues, could play a tumor-suppressive role in a Wnt/β-catenin-related way. <<<
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2.
龙海晨 (2024-07-08 09:45):
#paper Li X, Sun X, Li L, Luo Y, Chi Y, Zheng G. MDM2-mediated ubiquitination of LKB1 contributes to the development of diabetic cataract. Exp Cell Res. 2022 Aug 1;417(1):113191. doi: 10.1016/j.yexcr.2022.113191. Epub 2022 May 2. PMID: 35513074.糖尿病性白内障(Diabetic cataract,DC)是糖尿病的常见并发症。晶状体上皮细胞(lens epithelial cells , LEC)的上皮-间质转化(epithelial-mesenchymal transition, EMT)在DC发展中起关键作用。鼠双微体2(Murine double minute 2 ,MDM2)是一种E3泛素连接酶,通过调节多种靶点促进EMT。文章发现DC患者和大鼠晶状体中MDM2的mRNA和蛋白质水平上调。因此,构建了高糖(high glucose ,HG)诱导的人晶状体上皮细胞( human lens epithelial cells,HLEC)进行进一步研究。结果表明,HG培养的HLEC中MDM2水平升高,MDM2敲低减轻了HG诱导的异常迁移、EMT和氧化应激损伤。免疫共沉淀和泛素化试验表明,MDM2 通过泛素化降解下调了 LKB1 的表达。研究发现,LKB1 在人类和大鼠 DC 晶状体以及 HG 刺激的 HLEC 中表达较低。此外,LKB1 过表达减轻了 HG 诱导的 HLEC 功能障碍。研究数据显示,MDM2 敲低引起的 EMT 和氧化应激相关变化可以通过 LKB1 下调得到恢复。
3.
龙海晨 (2024-06-06 01:44):
#paper Sun Q, Zhang Y, Wang S, Yang F, Cai H, Xing Y, Zhou L, Chen S, Wang Y. LncRNA HOTAIR promotes α-synuclein aggregation and apoptosis of SH-SY5Y cells by regulating miR-221-3p in Parkinson's disease. Exp Cell Res. 2022 Aug 1;417(1):113132. doi: 10.1016/j.yexcr.2022.113132. Epub 2022 Apr 6. PMID: 35398161. 帕金森病 (Parkinson's disease,PD) 是一种常见的神经退行性疾病,其特征是神经元逐渐丢失。PD 的发病机制与细胞凋亡、炎症、氧化应激和 α-突触核蛋白聚集体的积累密切相关。本研究旨在探讨长链非编码RNA(long non-coding RNA ,lncRNA)HOX转录本反义RNA(HOX transcript antisense RNA,HOTAIR)在PD中的作用及其机制,文章研究检测了1-甲基-4-苯基-1,2,3,6-四氢吡啶盐酸盐(1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-hydrochloride,MPTP)处理的小鼠脑组织中HOTAIR、miR-221-3p和α-突触核蛋白的表达水平,探讨了HOTAIR对MPP +处理的SH-SY5Y细胞活力、凋亡、炎症和氧化应激的影响,并研究了HOTAIR/miR-221-3p/α-突触核蛋白的ceRNA调控网络。文章的研究结果显示,1、在 PD 模型中,HOTAIR 表达水平较高,而 miR-221-3p 表达水平较低。2、HOTAIR 敲低降低了 MPP+ 的神经毒性。3、HOTAIR降低了miR-221-3p的表达。4、α-突触核蛋白是 miR-221-3p 的靶基因。5、抑制 miR-221-3p 可逆转HOTAIR 敲低的神经保护作用。
Abstract:
Parkinson's disease (PD) is a common neurodegenerative disease. Here, the purpose of the study was to explore the function of long non-coding RNA (lncRNA) HOX transcript antisense RNA (HOTAIR) in … >>>
Parkinson's disease (PD) is a common neurodegenerative disease. Here, the purpose of the study was to explore the function of long non-coding RNA (lncRNA) HOX transcript antisense RNA (HOTAIR) in PD and its underlying mechanism. An in vivo 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine-hydrochloride (MPTP)-induced mouse model of PD was generated and the SH-SY5Y cells were treated with MPP to induce neuronal damage in vitro. Quantitative real-time polymerase chain reaction (QRT-PCR) and Western blot were used to detect the expression of HOTAIR, miR-221-3p, α-synuclein and apoptosis-related genes. MTT, flow cytometry and TUNEL assay was used to detect cell viability and apoptosis, respectively. The levels of inflammatory cytokines TNF-α,IL-1β and IL-6 were detected by ELISA assay. The levels of lactate dehydrogenase (LDH), reactive oxygen species (ROS), and superoxide dismutase (SOD) were determined using the appropriate assay kits. The interactions between miR-221-3p and HOTAIR or α-synuclein were determined by dual luciferase assay and RNA binding protein immunoprecipitation (RIP). Co-localization of HOTAIR and miR-221-3p was also proved by immunofluorescence staining. The results showed that HOTAIR was highly expressed, while miR-221-3p expression was decreased in PD model in vivo and in vitro. In SH-SY5Y cells treated with MPP, the knockdown of HOTAIR increased cell viability and reduced cell apoptosis, the secretion of inflammatory cytokines and oxidative stress reaction, while HOTAIR overexpression led to opposite effects. Furthermore, HOTAIR sponged miR-221-3p which directly targeted α-synuclein and thus regulated the expression of α-synuclein. Meanwhile, inhibiting miR-221-3p could partially reverse the neuroprotective effects of HOTAIR knockdown. In conclusion, HOTAIR attenuated the injury of SH-SY5Y cells induced by MPP via miR-221-3p/α-synuclein axis, suggesting the potential therapeutic value of HOTAIR in PD. <<<
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4.
龙海晨 (2024-05-06 19:00):
#paper Wei X, Wu J, Li J, Yang Q. PLK2 targets GSK3β to protect against cisplatin-induced acute kidney injury. Exp Cell Res. 2022 Aug 1;417(1):113181. doi: 10.1016/j.yexcr.2022.113181. Epub 2022 May 4. PMID: 35523306.顺铂引起的急性肾损伤(AKI)是一种复杂的危重疾病,伴有肾功能迅速下降和高死亡风险,目前尚无有效或特异的治疗方法。Polo 样激酶 2 Polo-like kinase 2(PLK2) 是一种丝氨酸/苏氨酸激酶,参与多种疾病的进展,包括癌症、心脏纤维化、糖尿病肾病等。文章鉴定出 PLK2 是 AKI 肾组织中显着上调的基因,然后在不同的 AKI 动物模型和细胞模型中进行了验证。使用 siRNA 或抑制剂抑制 PLK2 可以通过诱导严重的细胞凋亡和氧化应激损伤来增强顺铂诱导的 AKI,而强制 PLK2 表达可以预防顺铂诱导的肾功能障碍。文章的主要亮点:PLK2 在急性肾损伤模型中显着增强。上调 PLK2 可以逆转顺铂诱导的细胞凋亡和氧化应激。PLK2 通过磷酸化 GSK3β 来调节顺铂诱导的细胞凋亡和氧化应激。
Abstract:
Cisplatin-induced acute kidney injury (AKI), which is accompanied by a rapid decline in renal function and a high risk of death, is a complex critical illness with no effective or … >>>
Cisplatin-induced acute kidney injury (AKI), which is accompanied by a rapid decline in renal function and a high risk of death, is a complex critical illness with no effective or specific treatment. Polo-like kinase 2 (PLK2), a serine/threonine kinase, is involved in the progression of multiple diseases, including cancers, cardiac fibrosis, diabetic nephropathy, etc. Here, by integrating two Gene Expression Omnibus (GEO) datasets of cisplatin-induced AKI animal models, we identified PLK2 as a significantly up-regulated gene in AKI renal tissues, which was then verified in different AKI animal models and cell models. Suppressing PLK2 using siRNAs or inhibitors could enhance cisplatin-induced AKI by inducing severe apoptosis and oxidative stress damage, while enforced PLK2 expression could prevent renal dysfunction induced by cisplatin. We further discovered that PLK2 might phosphorylate glycogen synthase kinase 3β (GSK3β) in the pathogenesis of AKI. In conclusion, our results show that PLK2 play a protective role in cisplatin-induced AKI and may be a new protective target of cisplatin nephrotoxicity. <<<
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5.
龙海晨 (2024-04-01 09:07):
#paper Yamashita S, Tanaka M, Ida C, Kouyama K, Nakae S, Matsuki T, Tsuda M, Shirai T, Kamemura K, Nishi Y, Moss J, Miwa M. Physiological levels of poly(ADP-ribose) during the cell cycle regulate HeLa cell proliferation. Exp Cell Res. 2022 Aug 1;417(1):113163. doi: 10.1016/j.yexcr.2022.113163. Epub 2022 Apr 18. PMID: 35447104; PMCID: PMC10009817. PAR: Poly(ADP-ribose) ;PARG Poly(ADP-ribose) glycohydrolase ; PARP Poly(ADP-ribose) polymerase ;该文章在在不使用PARG抑制剂的情况下量化了HeLa细胞整个细胞周期内PAR的基本水平,发现S期的PAR水平显着高于G1期,其次非应激条件下PAR的半衰期小于40秒,这与S期大量NAD +的消耗一致,这是由PARP抑制剂挽救的。第三,PARP抑制剂使细胞周期延迟至S期。第四,S期期间PAR水平的增加与PARP1、PARG、NAD +和pERK2的水平无关。第五,纯化的 PARP1 在 DNA 不存在的情况下被组蛋白 H4 激活。PARP 抑制剂延迟 S 期细胞周期并减少细胞增殖。
Abstract:
Protein targets of polyADP-ribosylation undergo covalent modification with high-molecular-weight, branched poly(ADP-ribose) (PAR) of lengths up to 200 or more ADP-ribose residues derived from NAD. PAR polymerase 1 (PARP1) is the … >>>
Protein targets of polyADP-ribosylation undergo covalent modification with high-molecular-weight, branched poly(ADP-ribose) (PAR) of lengths up to 200 or more ADP-ribose residues derived from NAD. PAR polymerase 1 (PARP1) is the most abundant and well-characterized enzyme involved in PAR biosynthesis. Extensive studies have been carried out to determine how polyADP-ribosylation (PARylation) regulates cell proliferation during cell cycle, with conflicting conclusions. Since significant activation of PARP1 occurs during cell lysis in vitro, we changed the standard method for cell lysis, and using our sensitive ELISA system, quantified without addition of a PAR glycohydrolase inhibitor and clarified that the PAR level is significantly higher in S phase than that in G1. Under normal condition in the absence of exogenous DNA-damaging agent, PAR turns over with a half-life of <40 s; consistent with significant decrease of NAD levels in S phase, which is rescued by PARP inhibitors, in line with the observed rapid turnover of PAR. PARP inhibitors delayed cell cycle in S phase and decreased cell proliferation. Our results underscore the importance of a suitable assay system to measure rapid PAR chain dynamics in living cells and aid our understanding of the function of PARylation during the cell cycle. <<<
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6.
龙海晨 (2024-03-08 21:11):
#paper Catta-Preta CMC, de Azevedo-Martins AC, de Souza W, Motta MCM. Effect of the endoplasmic reticulum stressor tunicamycin in Angomonas deanei heat-shock protein expression and on the association with the endosymbiotic bacterium. Exp Cell Res. 2022 Aug 1;417(1):113162. doi: 10.1016/j.yexcr.2022.113162. Epub 2022 Apr 20. PMID: 35460679.这是一篇研究细胞基础结构方面的文章,文章用锥虫细胞为对象研究内质网(ER)应激。用衣霉素Tunicamycin (TM) 作为诱导剂,研究热休克蛋白Hsp90 表达变化。通过超微结构和蛋白质组学方法研究了TM在单胞菌及其共生细菌之间的关联中的作用。所获得的数据表明了ER对原核生物和真核生物之间共生关系的适应和维持的重要性。
Abstract:
The endoplasmic reticulum (ER) presents unique properties to establishing bacterium symbiosis in eukaryotic cells since it synthesizes and glycosylates essential molecules like proteins and lipids. Tunicamycin (TM) is an antibiotic … >>>
The endoplasmic reticulum (ER) presents unique properties to establishing bacterium symbiosis in eukaryotic cells since it synthesizes and glycosylates essential molecules like proteins and lipids. Tunicamycin (TM) is an antibiotic that inhibits the first step in the N-linked glycosylation in eukaryotes and has been used as an ER stress inducer to activate the Unfolded Protein Response (UPR). Mutualistic symbiosis in trypanosomatids is characterized by structural adaptations and intense metabolic exchanges, thus we investigated the effects of TM in the association between Angomonas deanei and its symbiotic bacterium, through ultrastructural and proteomic approaches. Cells treated with the inhibitor showed a decrease in proliferation, enlargement of the ER and Golgi cisternae and an increased distance between the symbiont and the ER. TM proved to be an important tool to better understand ER stress in trypanosomatids, since changes in protein composition were observed in the host protozoan, especially the expression of the Hsp90 chaperone. Furthermore, data obtained indicates the importance of the ER for the adaptation and maintenance of symbiotic associations between prokaryotes and eukaryotes, considering that this organelle has recognized importance in the biogenesis and division of cell structures. <<<
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7.
龙海晨 (2022-09-01 12:18):
#paper Luo F, Lin K. N6-methyladenosine (m6A) reader IGF2BP1 accelerates gastric cancer aerobic glycolysis in c-Myc-dependent manner[J]. Experimental Cell Research, 2022, 417(1): 113176. PMID: 35489385  DOI: 10.1016/j.yexcr.2022.113176 该文章研究了N 6-甲基腺苷(m 6 A),RNA m 6 A reader IGF2BP1 在胃癌发生发展中的作用。m 6 A参与调节多种癌症中的癌细胞增殖、转移、形成。文章分析了IGF2BP1在胃癌(gastric cancer,GC)中的功能和机制。研究结果表明,IGF2BP1 在 GC 组织中上调,可作为 GC 患者预后不良的预测因子。在功能上,IGF2BP1 促进体外 GC 细胞迁移和有氧糖酵解。IGF2BP1 敲低抑制了体内肿瘤的生长。文章证明了 IGF2BP1 通过 m6A 依赖性方式直接与 c-MYC mRNA 相互作用。文章发现,m 6 A reader IGF2BP1 以依赖 m 6 A/c-Myc 方式促进了 GC 的致癌性,这可能为 GC 提供治疗策略。
Abstract:
The N-methyladenosine (mA) is involved in the regulation of cell proliferation and metastasis formation in multiple cancers. However, the biological significance of RNA mA reader IGF2BP1 and the modification of … >>>
The N-methyladenosine (mA) is involved in the regulation of cell proliferation and metastasis formation in multiple cancers. However, the biological significance of RNA mA reader IGF2BP1 and the modification of IGF2BP1 itself have not been fully investigated. Here, we analyzed the functions and mechanism of IGF2BP1 in gastric cancer (GC). Results showed that IGF2BP1 upregulated in GC tissue and acted as a predictor of poor prognosis for GC patients. Functionally, IGF2BP1 promoted the migration and aerobic glycolysis of GC cells in vitro. Moreover, IGF2BP1 knockdown repressed the tumor growth in vivo. We also demonstrated that IGF2BP1 directly interacted with c-MYC mRNA via m6A-dependent manner to by stabilize its stability. Overall, these findings demonstrated that mA reader IGF2BP1 facilitated the carcinogenic of GC in mA/c-Myc-dependent manner, which might provide critical therapeutic strategy for GC. <<<
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