龙海晨 (2022-12-01 17:34):
#paper Wang L, Jiang D, Zhang L. A thermophilic 8-oxoguanine DNA glycosylase from Thermococcus barophilus Ch5 is a new member of AGOG DNA glycosylase family[J]. Acta biochimica et biophysica Sinica.PMID: 35713316 DOI: 10.3724/abbs.2022072 DNA中的8-氧代胍(8oxoguanine,8oxoG)是一种主要的氧化碱基,对基因组稳定性构成严重威胁。细胞已经进化出8oxoG-DNA糖苷酶(OGG)来抵消8oxoG在DNA中产生的诱变。目前,OGG酶分为三个家族:OGG1、OGG2和AGOG。文章研究发现,来自超嗜热性欧氏菌T嗜酸乳杆菌Ch5的Tb-AGOG能在75-95摄氏度pH9.0的时候去除8oxoG有最大效率。Tb-AGOG是一种双功能DNA糖苷酶,具有糖苷酶活性和AP裂解酶活性。文章阐述了AGOG的作用机制。Tb-AGOG中的残基D41和D229对催化至关重要。
A thermophilic 8-oxoguanine DNA glycosylase from Thermococcus barophilus Ch5 is a new member of AGOG DNA glycosylase family
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Abstract:
8-Oxoguanine (8oxoG) in DNA is a major oxidized base that poses a severe threat to genome stability. To counteract the mutagenic effect generated by 8oxoG in DNA, cells have evolved 8oxoG DNA glycosylase (OGG) that can excise this oxidized base from DNA. Currently, OGG enzymes have been divided into three families: OGG1, OGG2 and AGOG (archaeal 8oxoG DNA glycosylase). Due to the limited reports, our understanding on AGOG enzymes remains incomplete. Herein, we present evidence that an AGOG from the hyperthermophilic euryarchaeon Ch5 (Tb-AGOG) excises 8oxoG from DNA at high temperature. The enzyme displays maximum efficiency at 75°C-95°C and at pH 9.0. As expected, Tb-AGOG is a bifunctional glycosylase that harbors glycosylase activity and AP (apurinic/apyrimidinic) lyase activity. Importantly, we reveal for the first time that residue D41 in Tb-AGOG is essential for 8oxoG excision and intermediate formation, but not essential for DNA binding or AP cleavage. Furthermore, residue E79 in Tb-AGOG is essential for 8oxoG excision and intermediate formation, and is partially involved in DNA binding and AP cleavage, which has not been described among the reported AGOG members to date. Overall, our work provides new insights into catalytic mechanism of AGOG enzymes.
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