小年 (2022-11-30 18:38):
https://doi.org/10.1038/s41467-021-21865-2 nature communications, 2021, Single cell transcriptomic analysis of murine lung development on hyperoxia-induced damage. 本文构建高氧损伤小鼠肺模型模拟支气管肺发育不良,进行单细胞转录组测序分析研究,评估小鼠肺单细胞发育动态。按3个时间节点,捕获了36只小鼠肺的超66,000个单细胞。分别从肺泡上皮、基质成纤维细胞、毛细血管内皮和巨噬细胞等亚群方面阐述肺损伤小鼠随着时间发育在细胞数目和基因层面的变化,通路分析和细胞动态串扰预测表明炎症信号是高氧诱导变化的主要驱动因素。本文提供了一个较广泛的健康小鼠和肺受损小鼠发育过程中的细胞组成图谱,但细胞类型较为受限,更为精细的细胞亚群注释依赖于亚群marker和细胞形态学认识的提升。
IF:14.700Q1 Nature communications, 2021-03-10. DOI: 10.1038/s41467-021-21865-2 PMID: 33692365
Single cell transcriptomic analysis of murine lung development on hyperoxia-induced damage
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Abstract:
During late lung development, alveolar and microvascular development is finalized to enable sufficient gas exchange. Impaired late lung development manifests as bronchopulmonary dysplasia (BPD) in preterm infants. Single-cell RNA sequencing (scRNA-seq) allows for assessment of complex cellular dynamics during biological processes, such as development. Here, we use MULTI-seq to generate scRNA-seq profiles of over 66,000 cells from 36 mice during normal or impaired lung development secondary to hyperoxia with validation of some of the findings in lungs from BPD patients. We observe dynamic populations of cells, including several rare cell types and putative progenitors. Hyperoxia exposure, which mimics the BPD phenotype, alters the composition of all cellular compartments, particularly alveolar epithelium, stromal fibroblasts, capillary endothelium and macrophage populations. Pathway analysis and predicted dynamic cellular crosstalk suggest inflammatory signaling as the main driver of hyperoxia-induced changes. Our data provides a single-cell view of cellular changes associated with late lung development in health and disease.
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