Vincent
(2023-10-31 14:27):
#paper https://doi.org/10.1038/s41576-022-00477-6 Nat Rev Genet 2022 Making sense of the ageing methylome
衰老近些年引起了比较大的研究兴趣。这篇综述文章总结了近些年关于衰老的甲基化组学研究。文章介绍了寻找衰老关联位点的几种统计方法和对应的工具,例如最常见的使用线性模型寻找差异化位点,使用假设检验寻找变异位点,以及通过使用熵值和相关性网络等统计工具寻找更复杂的变化模式。此外文章还介绍了一些有趣的与衰老相关的甲基化证据,探讨了通过干预甲基化模式与机制来达到延长寿命的策略。最后文章还讨论了甲基化年龄机理的相关理论。
Making sense of the ageing methylome
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Abstract:
Over time, the human DNA methylation landscape accrues substantial damage, which has been associated with a broad range of age-related diseases, including cardiovascular disease and cancer. Various age-related DNA methylation changes have been described, including at the level of individual CpGs, such as differential and variable methylation, and at the level of the whole methylome, including entropy and correlation networks. Here, we review these changes in the ageing methylome as well as the statistical tools that can be used to quantify them. We detail the evidence linking DNA methylation to ageing phenotypes and the longevity strategies aimed at altering both DNA methylation patterns and machinery to extend healthspan and lifespan. Lastly, we discuss theories on the mechanistic causes of epigenetic ageing.
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